Index

_

__init__() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupDefinition method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.parsed_params.Param method) (trackhub.SubGroupDefinition method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method)

A

add_child() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method) add_genomes_file() (trackhub.Hub method) add_groups() (trackhub.GroupsFile method) add_params() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.ViewTrack method) add_parent() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method)

add_subgroups() (trackhub.AggregateTrack method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.ViewTrack method) add_subtrack() (trackhub.AggregateTrack method) (trackhub.CompositeTrack method) add_trackdb() (trackhub.AggregateTrack method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.ViewTrack method) add_tracks() (trackhub.AggregateTrack method) (trackhub.CompositeTrack method) (trackhub.SuperTrack method) (trackhub.TrackDb method) (trackhub.ViewTrack method) add_view() (trackhub.CompositeTrack method) AggregateTrack (class in trackhub) Assembly (class in trackhub)

B

BaseTrack (class in trackhub)

C

CompositeTrack (class in trackhub)

D

data_dir() (in module trackhub.helpers)

dimensions_from_subgroups() (in module trackhub.helpers)

F

filter_composite_from_subgroups() (in module trackhub.helpers)

G

Genome (class in trackhub) GenomesFile (class in trackhub)

GroupDefinition (class in trackhub) GroupsFile (class in trackhub)

H

hex2rgb() (in module trackhub.helpers)

Hub (class in trackhub) HubComponent (class in trackhub.base)

L

leaves() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method)

P

Param (class in trackhub.parsed_params)

R

remove_params() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.ViewTrack method) render() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method)

root() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method)

S

sanitize() (in module trackhub.helpers) stage_hub() (in module trackhub.upload)

SubGroupDefinition (class in trackhub) SuperTrack (class in trackhub)

T

Track (class in trackhub)

TrackDb (class in trackhub)

U

upload_hub() (in module trackhub.upload)

V

validate() (trackhub.AggregateTrack method) (trackhub.Assembly method) (trackhub.base.HubComponent method) (trackhub.BaseTrack method) (trackhub.CompositeTrack method) (trackhub.Genome method) (trackhub.GenomesFile method) (trackhub.GroupsFile method) (trackhub.Hub method) (trackhub.SuperTrack method) (trackhub.Track method) (trackhub.TrackDb method) (trackhub.ViewTrack method)

ViewTrack (class in trackhub)