trackhub
1.0
Quickstart
Track hub from Excel
Validation
Organizing larger track hubs
Documenting tracks in hubs
Assembly example
groupAutoScale example
Examples of hubs using various supported track types
Testing infrastructure
API documentation
trackhub.base.HubComponent
trackhub.Hub
trackhub.GenomesFile
trackhub.Genome
trackhub.TrackDb
trackhub.BaseTrack
trackhub.Track
trackhub.CompositeTrack
trackhub.ViewTrack
trackhub.SuperTrack
trackhub.AggregateTrack
trackhub.SubGroupDefinition
trackhub.parsed_params.Param
trackhub.GroupsFile
trackhub.GroupDefinition
trackhub.Assembly
trackhub.upload.stage_hub
trackhub.upload.upload_hub
upload_hub()
trackhub.helpers.dimensions_from_subgroups
trackhub.helpers.filter_composite_from_subgroups
trackhub.helpers.hex2rgb
trackhub.helpers.sanitize
trackhub.helpers.data_dir
Changelog
trackhub
API documentation
trackhub.upload.upload_hub
View page source
trackhub.upload.upload_hub
trackhub.upload.
upload_hub
(
hub
,
host
,
remote_dir
,
user
=
None
,
port
=
22
,
rsync_options
=
'--progress
-rvL'
,
staging
=
None
)
[source]
Renders, stages, and uploads a hub.