gffutils
0.13
Installation
Importing data into a database
Database schema
Database IDs
GTF files
Dialects
Attributes
Examples
API
gffutils
Create a database
Interact with a database
gffutils.interface.FeatureDB
gffutils.interface.FeatureDB.children
gffutils.interface.FeatureDB.parents
gffutils.interface.FeatureDB.schema
FeatureDB.schema()
gffutils.interface.FeatureDB.features_of_type
gffutils.interface.FeatureDB.count_features_of_type
gffutils.interface.FeatureDB.all_features
gffutils.interface.FeatureDB.execute
gffutils.interface.FeatureDB.featuretypes
gffutils.interface.FeatureDB.region
gffutils.interface.FeatureDB.iter_by_parent_childs
gffutils.interface.FeatureDB.update
gffutils.interface.FeatureDB.delete
gffutils.interface.FeatureDB.add_relation
gffutils.interface.FeatureDB.set_pragmas
gffutils.interface.FeatureDB.interfeatures
gffutils.interface.FeatureDB.children_bp
gffutils.interface.FeatureDB.merge
gffutils.interface.FeatureDB.create_introns
gffutils.interface.FeatureDB.bed12
Feature objects
Integration with other tools
Utilities
Change log
Developer’s docs
Meta-docs (docs about the docs)
gffutils
API
gffutils.interface.FeatureDB.schema
View page source
gffutils.interface.FeatureDB.schema
FeatureDB.
schema
(
)
[source]
Returns the database schema as a string.