Installation

Using conda:

conda install --channel bioconda gffutils

Or pip:

pip install gffutils

gffutils is tested with Python 2.7 and Python 3.3.

Optional requirements

  • BioPython (for creating SeqFeatures and SeqRecords)

  • pybedtools (for integration with pybedtools)

  • BEDTools (used by pybedtools)

Install them all with conda:

conda install --channel bioconda pybedtools bedtools biopython